Columbia Basin Fish and Wildlife Program Columbia Basin Fish and Wildlife Program
SOW Report
Contract 74723: 2003-063-00 EXP REPRO SUCCESS ABERNATHY CREEK
Project Number:
Title:
Natural Reproductive Success and Demographic Effects of Hatchery-Origin Steelhead in Abernathy Creek, Washington
Stage:
Complete
Area:
Province Subbasin %
Basinwide - 100.00%
Contract Number:
74723
Contract Title:
2003-063-00 EXP REPRO SUCCESS ABERNATHY CREEK
Contract Continuation:
Previous: Next:
71238: 2003-063-00 EXP REPRO SUCCESS ABERNATHY CREEK
  • 78003: 2003-063-00 EXP REPRO SUCCESS ABERNATHY CREEK
Contract Status:
Closed
Contract Description:
Our goal is to compare hatchery-origin and natural-origin steelhead and assess the demographic effects of hatchery fish supplementation in Abernathy Creek relative to two control streams. Currently the ability of hatchery-origin steelhead to contribute to the recovery of naturally spawning populations while minimizing genetic and ecological risks is unknown.

This project will compare hatchery-origin (HOR) and natural-origin (NOR) steelhead trout, simultaneously investigating methods of operating a conservation hatchery and the effectiveness of artificial production of an integrated NOR/HOR broodstock on recovery. This directly addresses 2008 NOAA Fisheries FCRPS Biological Opinion (NWF v. NMFS, Civ. No. CV 01-640-RE (D. Oregon)) reasonable and prudent alternatives (RPAs) 63.1, 64.1, and 64.2. The ability of HOR adults to contribute, via supplementation, to the recovery of naturally spawning steelhead populations is still a major uncertainty in the Pacific Northwest. This question has been debated intensively throughout the Columbia River Basin for over 10 years but remains unresolved. Additionally, the source of broodstock for supplementation programs may have negative genetic and ecological impacts on natural populations. The development of native broodstocks of hatchery steelhead may pose unacceptable biological risks to naturally spawning populations that are listed as threatened or endangered under the Endangered Species Act (ESA). The traditional method of initiating new hatchery broodstock of anadromous salmonids is to trap adults during their spawning migration. However, removing NOR adults from ESA listed populations may not be biologically acceptable because such activities may further depress those populations. Also, trapping large numbers of adult steelhead may not be feasible in many subbasins because high water in the spring during steelhead migrations often destroys temporary weirs. As a result, alternative methods for developing broodstocks from NOR steelhead are highly desired.

This project provides an assessment of an alternative method of establishing a native salmonid broodstock when large numbers of native adults are unavailable, a common issue for the establishment of conservation hatcheries. Abernathy Fish Technology Center (AFTC) developed an integrated NOR/HOR steelhead broodstock starting with pre-smolt NOR juveniles collected from Abernathy Creek that were reared to sexual maturity in a hatchery. Broodstock programs developed through juvenile collections have the advantage of increasing the genetic effective population size by potentially incorporating the offspring of all adults that spawn successfully within a stream or watershed.  In turn, greater genetic effective population size of the hatchery stock reduces the risk of genetically “swamping” the natural spawning population with a few over-represented families. In order to minimize genetic differences between NOR and HOR steelhead, we will continue to utilize captured NOR steelhead to maintain an integrated NOR/HOR broodstock. NOR and HOR upstream migrating adults will continue to be genotyped so we can focus on parentage assignment for adults.  

Our renewed focus on strict adherence to spawning protocols will allow us to assess our ability to maintain genetic similarity between the HOR and NOR components of the Abernathy Creek steelhead population and correct the effects of previously using a small proportion of NOR broodstock in the hatchery.  This project year, we are again increasing our efforts to control access of ungenotyped adults above the AFTC weir.  Genetic effects in addition to juvenile steelhead production and adult returns occurring within Abernathy Creek will be compared to two control streams (i.e. Germany and Mill creeks).  In response to a recommendation by the Independent Scientific Review Group, we will continue validation in Abernathy Creek of redd survey counts that are used to estimate adult returns (Objective 9, to be completed under contract with Washington Department of Fish and Wildlife).  Additionally, we are evaluating hatchery rearing methods and their impacts on behavior, physiology, and gene expression of HOR steelhead. We continue to assess demographic changes and differences in behavior and physiology between NOR and HOR steelhead to evaluate the impact of the supplementation program. Assignment of adult progeny will also allow us to assess correlations in biological characteristics (e.g. physiological traits, run timing, return size and age) between parents and returning adult offspring.  Comparing HOR and NOR adults coupled with monitoring demographic changes in population abundance along with behavioral and physiological differences, with appropriate natural population controls, is critical to assessment of artificial production in conservation hatcheries.


OBJECTIVES
Objective  1. Maintain a conservation hatchery broodstock of steelhead using protocols to minimize effects of artificial rearing on an integrated broodstock.
Objective  2. Use selectively-neutral, DNA markers to determine the amount of genetic change associated with captive rearing of NOR steelhead.
Objective  3. Estimate total annual smolt emigration and behavior of steelhead in Abernathy, Germany, and Mill creeks.
Objective  4. Assess physiological status of HOR and NOR steelhead smolts.
Objective  5. Control passage of HOR and NOR for evaluation of relative reproductive success; retain some steelhead for conservation hatchery broodstock.
Objective  6. Develop conservation hatchery broodstock of steelhead that is genetically integrated.
Objective  7. Determine the relative, natural reproductive success of hatchery-origin (HOR) and natural-origin (NOR) steelhead in Abernathy Creek above Abernathy Fish Technology Center.
Objective  8. Manage and administer project and communicate work and results to BPA and the scientific community.
Objective  9. Validate steelhead redd count surveys.
Account Type(s):
Expense
Contract Start Date:
01/01/2017
Contract End Date:
12/31/2017
Current Contract Value:
$572,997
Expenditures:
$572,997

* Expenditures data includes accruals and are based on data through 31-Mar-2024.

BPA CO:
BPA COR:
Env. Compliance Lead:
Work Order Task(s):
Contract Type:
Contract (IGC)
Pricing Method:
Cost Reimbursement (CNF)
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Full Name Organization Write Permission Contact Role Email Work Phone
Patricia Crandell US Fish and Wildlife Service (USFWS) Yes Supervisor patricia_crandell@fws.gov (360) 442-7998x312
Desmond Gelman Bonneville Power Administration No CO Assistant dxgelman@bpa.gov (503) 230-4960
Michelle Guay Bonneville Power Administration No Env. Compliance Lead mxguay@bpa.gov (503) 230-3459
Kyle Hanson US Fish and Wildlife Service (USFWS) Yes Contract Manager kyle_hanson@fws.gov (360) 425-6072x319
Maureen Kavanagh Bonneville Power Administration Yes COR makavanagh@bpa.gov (503) 230-4272
Peter Lofy Bonneville Power Administration Yes F&W Approver ptlofy@bpa.gov (503) 230-4193
Khanida Mote Bonneville Power Administration Yes Contracting Officer kpmote@bpa.gov (503) 230-4599
Doug Peterson US Fish and Wildlife Service (USFWS) Yes Technical Contact doug_peterson@fws.gov (360) 425-6072x302
Christian Smith US Fish and Wildlife Service (USFWS) No Technical Contact christian_smith@fws.gov (360) 425-6072x337


Viewing of Work Statement Elements

Deliverable Title WSE Sort Letter, Number, Title Start End Complete
All administrative tasks fulfilled with timely quality products B: 119. Submit draft Funding Package - to COTR 12/29/2017 12/29/2017
Obtain NEPA documents C: 165. NEPA 12/29/2017 12/29/2017
Rear an integrated steelhead broodstock using protocols to minimize effects of artificial rearing D: 176. Rear BY16 integrated steelhead broodstock using protocols to minimize effects of artificial rearing 12/31/2017 12/29/2017
Maintain fish culture facilities E: 61. Maintain fish culture facilities 12/31/2017 12/29/2017
Hatchery Genetic Management Plan for Abernathy Creek steelhead F: 174. Update hatchery genetic management plan 12/31/2017 12/29/2017
Collect data about an integrated steelhead broodstock reared from fertilization to release G: 157. Collect data about an integrated steelhead broodstock reared from fertilization to release 12/31/2017 12/29/2017
Determine multilocus DNA genotypes for HOR & NOR smolts H: 157. Collect samples from BY16 HOR steelhead smolts; determine multi-locus DNA genotypes for HOR & NOR 12/31/2017 12/29/2017
Estimate genetic change for an integrated steelhead broodstock I: 162. Estimate genetic change for an integrated steelhead broodstock 12/31/2017 12/29/2017
Tag NOR/HOR steelhead juveniles; collect and store biological data/genetic samples J: 158. Tag NOR/HOR steelhead juveniles; collect and store biological data/genetic samples 12/31/2017 12/29/2017
Estimate NOR/HOR steelhead emigration and production using information from marked/recaptured smolts K: 162. Estimate NOR/HOR steelhead emigration and production using information from marked/recaptured smolts 12/31/2017 12/29/2017
Monitor NOR/HOR steelhead; install/maintain antennas; collect & store data, samples L: 157. Monitor NOR/HOR steelhead; install/maintain antennas; collect & store data, samples 12/31/2017 12/29/2017
Evaluate physiological status of NOR & BY16 HOR steelhead and nutritional status of BY17 HOR fish M: 157. Evaluate physiological/nutritional status of NOR/HOR steelhead 12/31/2017 12/29/2017
Collect tissues from adult female steelhead/their offspring; evaluate offspring condition/quality N: 157. Collect tissues from adult female steelhead/their offspring; evaluate offspring condition/quality 12/31/2017 12/29/2017
Perform statistical comparisons between NOR/HOR steelhead smolts for physiological parameters O: 162. Perform statistical comparisons between NOR/HOR steelhead smolts for physiological parameters 12/31/2017 12/29/2017
Capture adult HOR/NOR steelhead; release some above weir; retain some for integrated broodstock P: 157. Capture adult HOR/NOR steelhead; release some above weir; retain some for integrated broodstock 12/31/2017 12/29/2017
Calculate smolt-adult return rate for integrated conservation hatchery steelhead broodstock Q: 162. Calculate smolt-adult return rate for the integrated conservation hatchery steelhead broodstock 12/31/2017 12/29/2017
Spawn HOR/NOR steelhead returning to AFTC using protocols to maximize broodstock integration R: 176. Spawn HOR/NOR steelhead returning to AFTC; use protocols to maximize integration of BY17 broodstoc 12/31/2017 12/29/2017
Collect biological data, genetic samples from all HOR/NOR S: 157. Collect biological data, genetic samples from all HOR/NOR steelhead used for broodstock 12/31/2017 12/29/2017
Determine multilocus, microsat. nuclear DNA genotypes for NOR/HOR adult/juvenile steelhead samples T: 157. Determine multilocus, microsat. nuclear DNA genotypes for NOR/HOR adult/juvenile steelhead samples 12/31/2017 12/29/2017
Determine the relative reproductive success of NOR & HOR steelhead in Abernathy Creek above AFTC U: 162. Determine the relative reproductive success of NOR & HOR steelhead in Abernathy Creek above AFTC 12/31/2017 12/29/2017
Disseminate results through presentations through trainings, conferences, workshops, and websites V: 161. Disseminate results through presentations through trainings, conferences, workshops, and websites 12/31/2017 12/29/2017
Write papers and submit to peer reviewed journals for publication. W: 183. Write papers and submit to peer reviewed journals for publication. 12/31/2017 12/29/2017
Collect tag, sex, weight, and length data from migrating adult steelhead; sample scales/fin clips X: 157. Collect tag, sex, weight, and length data from migrating adult steelhead; sample scales/fin clips 12/31/2017 12/29/2017
Compare number of adult steelhead to redds; determine demographic information for steelhead Y: 162. Compare number of adult steelhead to redds; determine demographic information for steelhead 12/31/2017 12/29/2017
Submit BiOp RPA Report in cbfish.org Z: 202. BiOp RPA Report for CY 2016 03/15/2017 03/15/2017
Completed Annual Report AA: 132. Submit Progress Report for the period (Jan 2016) to (Dec 2016) 03/15/2017 03/15/2017

Viewing of Implementation Metrics
Viewing of Environmental Metrics Customize

Primary Focal Species Work Statement Elements
Steelhead (O. mykiss) - Lower Columbia River DPS (Threatened)
  • 2 instances of WE 176 Produce Hatchery Fish
  • 1 instance of WE 61 Maintain Artificial Production Facility/Infrastructure
  • 1 instance of WE 174 Produce Plan
  • 1 instance of WE 183 Produce Journal Article
  • 9 instances of WE 157 Collect/Generate/Validate Field and Lab Data
  • 1 instance of WE 158 Mark/Tag Animals
  • 1 instance of WE 161 Disseminate Raw/Summary Data and Results
  • 6 instances of WE 162 Analyze/Interpret Data

Sort WE ID WE Title NEPA NOAA USFWS NHPA Has Provisions Inadvertent Discovery Completed
A 185 Periodic Status Reports for BPA 01/01/2017
B 119 Submit draft Funding Package - to COTR 01/01/2017
C 165 NEPA 01/01/2017
D 176 Rear BY16 integrated steelhead broodstock using protocols to minimize effects of artificial rearing 12/31/2017
E 61 Maintain fish culture facilities 12/31/2017
F 174 Update hatchery genetic management plan 12/31/2017
G 157 Collect data about an integrated steelhead broodstock reared from fertilization to release 12/31/2017
H 157 Collect samples from BY16 HOR steelhead smolts; determine multi-locus DNA genotypes for HOR & NOR 12/31/2017
I 162 Estimate genetic change for an integrated steelhead broodstock 01/01/2017
J 158 Tag NOR/HOR steelhead juveniles; collect and store biological data/genetic samples 05/23/2017
K 162 Estimate NOR/HOR steelhead emigration and production using information from marked/recaptured smolts 01/01/2017
L 157 Monitor NOR/HOR steelhead; install/maintain antennas; collect & store data, samples 02/15/2017
M 157 Evaluate physiological/nutritional status of NOR/HOR steelhead 01/01/2017
N 157 Collect tissues from adult female steelhead/their offspring; evaluate offspring condition/quality 12/31/2017
O 162 Perform statistical comparisons between NOR/HOR steelhead smolts for physiological parameters 01/01/2017
P 157 Capture adult HOR/NOR steelhead; release some above weir; retain some for integrated broodstock 12/31/2017
Q 162 Calculate smolt-adult return rate for the integrated conservation hatchery steelhead broodstock 01/01/2017
R 176 Spawn HOR/NOR steelhead returning to AFTC; use protocols to maximize integration of BY17 broodstoc 12/31/2017
S 157 Collect biological data, genetic samples from all HOR/NOR steelhead used for broodstock 12/31/2017
T 157 Determine multilocus, microsat. nuclear DNA genotypes for NOR/HOR adult/juvenile steelhead samples 12/31/2017
U 162 Determine the relative reproductive success of NOR & HOR steelhead in Abernathy Creek above AFTC 01/01/2017
V 161 Disseminate results through presentations through trainings, conferences, workshops, and websites 01/01/2017
W 183 Write papers and submit to peer reviewed journals for publication. 01/01/2017
X 157 Collect tag, sex, weight, and length data from migrating adult steelhead; sample scales/fin clips 01/01/2017
Y 162 Compare number of adult steelhead to redds; determine demographic information for steelhead 01/01/2017
Z 202 BiOp RPA Report for CY 2016
AA 132 Submit Progress Report for the period (Jan 2016) to (Dec 2016) 01/01/2017