Columbia Basin Fish and Wildlife Program Columbia Basin Fish and Wildlife Program
SOW Report
Contract 54931: 2008-504-00 EXP STURGEON GENETIC STRUCTURE IN MID-C IMPOUNDMENTS
Project Number:
Title:
Sturgeon Genetics
BPA PM:
Stage:
Closed
Area:
Province Subbasin %
Mainstem - 100.00%
Contract Number:
54931
Contract Title:
2008-504-00 EXP STURGEON GENETIC STRUCTURE IN MID-C IMPOUNDMENTS
Contract Continuation:
Previous: Next:
50512: 2008-504-00 EXP STURGEON GENETICS
  • 58655: 2008-504-00 EXP STURGEON GENETIC STRUCTURE IN MID-C IMPOUNDMENTS
Contract Status:
Closed
Contract Description:
This contract uses genetic markers to evaluate population structure of white sturgeon in the lower Columbia River and upstream of Bonneville Dam to the confluence of the Columbia and Snake Rivers.  The specific objectives are to 1) evaluate population differentiation and migration (gene flow) among reservoirs, 2) determine relatedness, mean productivity, and number of spawners within each reservoir, and 3) characterize broodstock including identifying origins (reservoir or population) and degree of relatedness among candidate broodstock fish for use in a potential  restoration and enhancement facility.  These three objectives address needs for determining genetic diversity, relative broodstock abundance, distribution and movement, and supplementation efforts.  A panel of microsatellite (uSAT) loci have been compiled and optimized with a locus scoring protocol adopted from researchers at the University of California at Davis (UCD; Andrea Drauch pers. comm.) for collection of standardized multilocus genotypic data.  The protocol provides the opportunity for future collaboration and complementary efforts among interested research groups.  Beginning with the currently proposed long-term monitoring effort, establishing a data repository will allow implementation of future pedigree studies for monitoring survival of hatchery releases, and ultimately for estimating natural reproductive success of both wild and released hatchery reared sturgeon.  The work related to these objectives will be completed by CRITFC and University of Idaho (UI) staff at the Hagerman Fish Culture Experiment Station.  Tissue samples will be collected by staff from CRITFC, WDFW, and ODFW, under projects associated with project 1986-050-00.  Genotyping and genetic analysis will be completed by CRITFC and UI staff in Hagerman, ID.  Geneticists with CRITFC have adequate expertise to complete each objective as evidenced in published peer-reviewed papers (e.g. Matala et al. 2008, Narum et al. 2007, Narum et al. 2008).
Account Type(s):
Expense
Contract Start Date:
11/01/2011
Contract End Date:
10/31/2012
Current Contract Value:
$39,479
Expenditures:
$39,479

* Expenditures data includes accruals and are based on data through 31-Mar-2024.

Env. Compliance Lead:
Work Order Task(s):
Contract Type:
Contract (IGC)
Pricing Method:
Cost Reimbursement (CNF)
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Viewing of Work Statement Elements

Deliverable Title WSE Sort Letter, Number, Title Start End Complete
Funding Package - Submit draft to COTR A: 119. Project Management 07/01/2012 09/30/2012
Compilation of a genetic data baseline for analysis, and allele score conversion. B: 162. Collection, transformation and management of (polyploid) genetic data 10/31/2012 10/31/2012
Create and manage a genetic data baseline of standardized genotypes. C: 159. Population structure and parentage database 10/31/2012 10/31/2012
Analysis of allele frequencies among reservoir-specific collections of white sturgeon. D: 162. Analysis of uSAT Frequencies 10/31/2012 10/31/2012
Results of white sturgeon genetic structure among reservoirs. E: 161. Annual results of population genetic structure and productivity. 10/31/2012 10/31/2012
Attach Progress Report in Pisces G: 132. Submit Progress Report for the period (Nov. 2011 to Oct. 2012) 10/31/2012 10/31/2012

Viewing of Implementation Metrics
Viewing of Environmental Metrics Customize

Primary Focal Species Work Statement Elements
Sturgeon, White (A. transmontanus) - Lower Columbia River
  • 1 instance of WE 159 Transfer/Consolidate Regionally Standardized Data
  • 1 instance of WE 161 Disseminate Raw/Summary Data and Results
  • 2 instances of WE 162 Analyze/Interpret Data

Sort WE ID WE Title NEPA NOAA USFWS NHPA Has Provisions Inadvertent Discovery Completed
A 119 Project Management 11/01/2011
B 162 Collection, transformation and management of (polyploid) genetic data 11/01/2011
C 159 Population structure and parentage database 11/01/2011
D 162 Analysis of uSAT Frequencies 11/01/2011
E 161 Annual results of population genetic structure and productivity. 11/01/2011
F 185 Periodic Status Reports for BPA 11/01/2011
G 132 Submit Progress Report for the period (Nov. 2011 to Oct. 2012) 11/01/2011